International collaboration and data sharing

This activity will focus on understanding how end users of the platform can upload datasets into international repositories.

This activity requires the project to document and mandatory metadata required by external repositories for Genomics, Metabolomics, Proteomics and Transcriptomics and create a data model for the platform to understand and store all data and metadata for both raw and processed data.

The project will also create a process to populate that metadata and a process to take metadata and data from the platform and ingest into international repositories.

This milestone will deliver:

  • Interoperability design document circulated to international collaborators.
  • Demonstration of prototype showing exchange and federation of Australian and EU reference pathogen datasets.