Platform

We have built a platform of cloud-based data services and tools for Australian researchers so they can combine genomic, transcriptomic, proteomic and metabolomic data, and then analyse and interpret these data.

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As noted above, the platform includes three core functional components:

1. GenomeSpace –  for temporary file storage and to connect data to various apps

2.  ABRPI-Data – this securely holds structured and searchable data. It’s built using Mediaflux.

3. Two hosted analysis environments that hold 100’s of analysis tools: ABRPI-Galaxy and ABRPI-PathwayTools

As well as many accompanying Tutorials demonstrating how to use the platform to undertake various analysis tasks

The platform is also linked to services that are hosted by 3rd parties (e.g. Degust)

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Currently, the platform (which is in its first phase of development), is tailored for housing and analysing data arising from bacterial
pathogens. The data has come from the BPA-sponsored ABPRI (Antibiotic Pathogen Resistance) consortium and access to the data and the platform as whole is currently restricted to members of that consortium for a period of beta testing.


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launch